Air Pollution and Lymphocyte Phenotype Proportions in Cord Blood

Effects of air pollution on morbidity and mortality may be mediated by alterations in immune competence. In this study we examined short-term associations of air pollution exposures with lymphocyte immunophenotypes in cord blood among 1,397 deliveries in two districts of the Czech Republic. We measured fine particulate matter < 2.5 μm in diameter (PM(2.5)) and 12 polycyclic aromatic hydrocarbons (PAHs) in 24-hr samples collected by versatile air pollution samplers. Cord blood samples were analyzed using a FACSort flow cytometer to determine phenotypes of CD3(+) T-lymphocytes and their subsets CD4(+) and CD8(+), CD19(+) B-lymphocytes, and natural killer cells. The mothers were interviewed regarding sociodemographic and lifestyle factors, and medical records were abstracted for obstetric, labor and delivery characteristics. During the period 1994 to 1998, the mean daily ambient concentration of PM(2.5) was 24.8 μg/m(3) and that of PAHs was 63.5 ng/m(3). In multiple linear regression models adjusted for temperature, season, and other covariates, average PAH or PM(2.5) levels during the 14 days before birth were associated with decreases in T-lymphocyte phenotype fractions (i.e., CD3(+) CD4(+), and CD8(+)), and a clear increase in the B-lymphocyte (CD19(+)) fraction. For a 100-ng/m(3) increase in PAHs, which represented approximately two standard deviations, the percentage decrease was −3.3% [95% confidence interval (CI), −5.6 to −1.0%] for CD3(+), −3.1% (95% CI, −4.9 to −1.3%) for CD4(+), and −1.0% (95% CI, −1.8 to −0.2%) for CD8(+) cells. The corresponding increase in the CD19(+) cell proportion was 1.7% (95% CI, 0.4 to 3.0%). Associations were similar but slightly weaker for PM(2.5). Ambient air pollution may influence the relative distribution of lymphocyte immunophenotypes of the fetus

Standardizing CYP2D6 Genotype to Phenotype Translation: Consensus Recommendations from the Clinical Pharmacogenetics Implementation Consortium and Dutch Pharmacogenetics Working Group

Peer Reviewedhttps://deepblue.lib.umich.edu/bitstream/2027.42/153095/1/cts12692_am.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/153095/2/cts12692-sup-0001-Supinfo.pdfhttps://deepblue.lib.umich.edu/bitstream/2027.42/153095/3/cts12692.pd

VPS: Excavating high-level C++ constructs from low-level binaries to protect dynamic dispatching

Polymorphism and inheritance make C++ suitable for writing complex software, but significantly increase the attack surface because the implementation relies on virtual function tables (vtables). These vtables contain function pointers that attackers can potentially hijack and in practice, vtable hijacking is one of the most important attack vector for C++ binaries. In this paper, we present VTable Pointer Separation (vps), a practical binary-level defense against vtable hijacking in C++ applications. Unlike previous binary-level defenses, which rely on unsound static analyses to match classes to virtual callsites, vps achieves a more accurate protection by restricting virtual callsites to validly created objects. More specifically, vps ensures that virtual callsites can only use objects created at valid object construction sites, and only if those objects can reach the callsite. Moreover, vps explicitly prevents false positives (falsely identified virtual callsites) from breaking the binary, an issue existing work does not handle correctly or at all. We evaluate the prototype implementation of vps on a diverse set of complex, real-world applications (MongoDB, MySQL server, Node.js, SPEC CPU2017/CPU2006), showing that our approach protects on average 97.8% of all virtual callsites in SPEC CPU2006 and 97.4% in SPEC CPU2017 (all C++ benchmarks), with a moderate performance overhead of 11% and 9% geomean, respectively. Furthermore, our evaluation reveals 86 false negatives in VTV, a popular source-based defense which is part of GCC

Early Childhood Lower Respiratory Illness and Air Pollution

BackgroundFew studies of air pollutants address morbidity in preschool children. In this study we evaluated bronchitis in children from two Czech districts: Teplice, with high ambient air pollution, and Prachatice, characterized by lower exposures.ObjectivesOur goal was to examine rates of lower respiratory illnesses in preschool children in relation to ambient particles and hydrocarbons.MethodsAir monitoring for particulate matter 2 years of age, for PAHs compared with fine particles. Preschool-age children may be particularly vulnerable to air pollution–induced illnesses

Telomeric expression sites are highly conserved in trypanosoma brucei

Subtelomeric regions are often under-represented in genome sequences of eukaryotes. One of the best known examples of the use of telomere proximity for adaptive purposes are the bloodstream expression sites (BESs) of the African trypanosome Trypanosoma brucei. To enhance our understanding of BES structure and function in host adaptation and immune evasion, the BES repertoire from the Lister 427 strain of T. brucei were independently tagged and sequenced. BESs are polymorphic in size and structure but reveal a surprisingly conserved architecture in the context of extensive recombination. Very small BESs do exist and many functioning BESs do not contain the full complement of expression site associated genes (ESAGs). The consequences of duplicated or missing ESAGs, including ESAG9, a newly named ESAG12, and additional variant surface glycoprotein genes (VSGs) were evaluated by functional assays after BESs were tagged with a drug-resistance gene. Phylogenetic analysis of constituent ESAG families suggests that BESs are sequence mosaics and that extensive recombination has shaped the evolution of the BES repertoire. This work opens important perspectives in understanding the molecular mechanisms of antigenic variation, a widely used strategy for immune evasion in pathogens, and telomere biology

Combination of atomic force microscopy and principal component analysis as a general method for direct recognition of functional and structural domains in nanonocomposite materials (p NA)

In this work, we report a simple method to direct identify nanometer sized textures in composite materials by means of AFM spectroscopy, aiming at recognizing structured region to be further investigated. It consists in acquiring a set of dynamic data organized in spectroscopy maps and subsequently extracting most valuable information by means of the principal component analysis (PCA) method. This algorithm projects the information of D spectroscopy curves, each containing P data, acquired at each point of an LxC grid into a subset of LxC maps without any assumption on the sample structure, filtering out redundancies and noise. As a consequence, a huge amount of 3D data is condensed into few 2D maps, easy to be examined. Results of this algorithm allow to find and locate regions of interest within the map, allowing a further reduction of data series to be extensively analyzed or modeled. In this work, we explain the main features of the method and show its application on a nanocomposite sampl

Associations between air pollutants and lymphocyte fractions: Percent changes in cord blood lymphocyte distributions, with 95% CIs, associated with increases of 100 ng/m PAH (A) or 25 μg/m PM (B) during the 14 days before birth

<p><b>Copyright information:</b></p><p>Taken from "Air Pollution and Lymphocyte Phenotype Proportions in Cord Blood"</p><p>Environmental Health Perspectives 2005;113(10):1391-1398.</p><p>Published online 15 Jun 2005</p><p>PMCID:PMC1281286.</p><p>This is an Open Access article: verbatim copying and redistribution of this article are permitted in all media for any purpose, provided this notice is preserved along with the article's original DOI.</p> All models adjusted for district, year of birth, time of day of delivery, labor medication and duration, number of previous pregnancies, and maternal education and smoking